The Koh Research Group
Bioorganic Chemistry / Chemical Biology
    Molecular Design and Synthesis
    Applied toReal Life Biological Problems.

The research within the Koh group focuses on the rational molecular design and synthesis of molecules which can serve to address important biological problems.



Our Approach to Research:
 Chemists are unique among scientists in their ability to understand and manipulate molecular structure at atomic resolution.  Over the past decade, efforts in structural biology, molecular biology and genomics have provided us with an unprecedented "chemical" view of biological systems.  These structures provide many new and exciting opportunities for chemists who are capable of understanding this molecular view of life and who can in turn make molecules which uniquely modify or control biomolecular processes.
Biologically inspired molecular design empowers organic chemists to create new molecules with unprecedented functions.  For example we have synthesized molecules which can be used to selectively regulate gene expression, molecules which can be used to pattern the expression of genes in response to light and molecules with can restore activity to mutated proteins found in patients with genetic diseases such as rickets and RTH (resistance to thyroid hormone).  (see below)
 
 




Research Interests:
 

Chemistry may provide new keys to control gene expression.
The sequencing of the human genome represents one of mankind's greatest achievements.  However, the genome also holds many promises and secrets yet to be realized.  Remarkably, the genome contains fewer genes than many expected and indeed most of the genome (greater than 90%) does not encode genes but may be involved in controlling the expression and replication of the genes.  Effectively, we now know the component parts but not what the parts do or how the parts are wired together.
We are working on several projects to develop new methods selectively and remotely control gene expression that will ultimately allow us to understand how our genes are expressed in a controlled dynamic system.

The nuclear hormone receptors are Nature's tool for remotely regulating gene transcription using the small organic molecules we know as hormones.  By altering the structure of these proteins by site-directed mutagenesis, we are generating new transcription control systems that respond to custom designed hormones that can be used for controlling gene therapies in medicine and for studies in biology.

We are also using our knowledge of crystal structures of hormone receptor members to design hormone analogs whose agonist (transcripton activating) properties are masked by photo-labile protecting groups.  This enables us to release active agonists and activate genes using light.  This new technique may enable to use focused light sources to activate gene expression at unprecedented levels of spatial and temporal resolution allowing us to address important question about the role of patterned gene expression in development, cell migration and metastasis and intercellular communication.
 

Can Molecular Design Compensate for Human Disease?
 

Naturally occurring mutations to hormone receptors are known to be associated with human genetic diseases such as rickets, RTH and certain forms of prostate cancer, diabetes, and leukemia.  Most often these mutations prevent the natural ligand from fitting into the binding site of the receptor.  Recently we have demonstrated that we can use structural information about these mutant receptors to design custom made hormones that selectively recover activity to mutant thyroid hormone receptors associated with the disease RTH in vitro.  We believe this to be the first example of a molecule being designed to complement a mutation associated with human genetic disease.
 




Learn more about:

John Koh
 

The Group.
 

The Lab.
 
 



The interface of chemistry and biology offers a vast array of opportunities for a new generation of chemists.   Organic chemists can no longer simply copy nature's molecules in hopes to find solutions to today's current health problems.  Armed with the traditional chemical skills of synthesis and design, chemists can uniquely understand the molecular basis for many biological problems and create unique molecular solutions.




 
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Last updated 06/25/02